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SPTY2D1 SPT2 chromatin protein domain containing 1 [ Crocodylus porosus (Australian saltwater crocodile) ]

Gene ID: 109321109, updated on 14-Mar-2024

Summary

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Gene symbol
SPTY2D1
Gene description
SPT2 chromatin protein domain containing 1
See related
Ensembl:ENSCPRG00005017230
Gene type
protein coding
RefSeq status
MODEL
Organism
Crocodylus porosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Longirostres; Crocodylidae; Crocodylus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current CroPor_comp1 (GCF_001723895.1) Unplaced Scaffold NW_017728947.1 (7554830..7582743)

NW_017728947.1Genomic Context describing neighboring genes Neighboring gene immunoglobulin superfamily member 22 Neighboring gene transmembrane protein 86A Neighboring gene UEV and lactate/malate dehyrogenase domains Neighboring gene tumor susceptibility 101 Neighboring gene uncharacterized LOC109321228

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017728947.1 Unplaced Scaffold Reference CroPor_comp1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein SPT2 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Crocodylus porosus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CroPor_comp1 Primary Assembly

Genomic

  1. NW_017728947.1 Reference CroPor_comp1 Primary Assembly

    Range
    7554830..7582743
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019551460.1 → XP_019407005.1  protein SPT2 homolog

    UniProtKB/TrEMBL
    A0A7M4FHB9
    Related
    ENSCPRP00005024815.1, ENSCPRT00005028966.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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