U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PROM1 prominin 1 [ Gavialis gangeticus (Gharial) ]

Gene ID: 109303906, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
PROM1
Gene description
prominin 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Gavialis gangeticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Longirostres; Gavialidae; Gavialinae; Gavialis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PROM1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
29
Annotation release Status Assembly Chr Location
100 current GavGan_comp1 (GCF_001723915.1) Unplaced Scaffold NW_017729033.1 (37486591..37641618, complement)

NW_017729033.1Genomic Context describing neighboring genes Neighboring gene fibroblast growth factor binding protein 1 Neighboring gene fibroblast growth factor binding protein 2 Neighboring gene uncharacterized LOC109303927 Neighboring gene transmembrane anterior posterior transformation 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_017729033.1 Unplaced Scaffold Reference GavGan_comp1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cholesterol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microvillus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in prominosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
prominin-1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gavialis gangeticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GavGan_comp1 Primary Assembly

Genomic

  1. NW_017729033.1 Reference GavGan_comp1 Primary Assembly

    Range
    37486591..37641618 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019526280.1 → XP_019381825.1  prominin-1 isoform X6

    Conserved Domains (1) summary
    pfam05478
    Location:19 → 812
    Prominin; Prominin

  2. XM_019526275.1 → XP_019381820.1  prominin-1 isoform X2

    Conserved Domains (1) summary
    pfam05478
    Location:19 → 812
    Prominin; Prominin

  3. XM_019526278.1 → XP_019381823.1  prominin-1 isoform X5

    Conserved Domains (1) summary
    pfam05478
    Location:19 → 821
    Prominin; Prominin

  4. XM_019526276.1 → XP_019381821.1  prominin-1 isoform X3

    Conserved Domains (1) summary
    pfam05478
    Location:19 → 821
    Prominin; Prominin

  5. XM_019526274.1 → XP_019381819.1  prominin-1 isoform X1

    Conserved Domains (1) summary
    pfam05478
    Location:19 → 821
    Prominin; Prominin

  6. XM_019526281.1 → XP_019381826.1  prominin-1 isoform X7

    Conserved Domains (1) summary
    pfam05478
    Location:11 → 760
    Prominin; Prominin

  7. XM_019526277.1 → XP_019381822.1  prominin-1 isoform X4

    Conserved Domains (1) summary
    pfam05478
    Location:19 → 821
    Prominin; Prominin
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.