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ZCCHC4 zinc finger CCHC-type containing 4 [ Gavialis gangeticus (Gharial) ]

Gene ID: 109303829, updated on 14-Mar-2024

Summary

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Gene symbol
ZCCHC4
Gene description
zinc finger CCHC-type containing 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Gavialis gangeticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Longirostres; Gavialidae; Gavialinae; Gavialis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current GavGan_comp1 (GCF_001723915.1) Unplaced Scaffold NW_017729033.1 (45303649..45330026)

NW_017729033.1Genomic Context describing neighboring genes Neighboring gene Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase Neighboring gene phosphatidylinositol 4-kinase type 2 beta Neighboring gene anaphase promoting complex subunit 4 Neighboring gene solute carrier family 34 member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017729033.1 Unplaced Scaffold Reference GavGan_comp1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables rRNA (adenine-N6-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger CCHC domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gavialis gangeticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GavGan_comp1 Primary Assembly

Genomic

  1. NW_017729033.1 Reference GavGan_comp1 Primary Assembly

    Range
    45303649..45330026
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019526131.1 → XP_019381676.1  zinc finger CCHC domain-containing protein 4 isoform X1

  2. XM_019526132.1 → XP_019381677.1  zinc finger CCHC domain-containing protein 4 isoform X2

  3. XM_019526133.1 → XP_019381678.1  zinc finger CCHC domain-containing protein 4 isoform X3

  4. XM_019526136.1 → XP_019381681.1  zinc finger CCHC domain-containing protein 4 isoform X5

  5. XM_019526135.1 → XP_019381680.1  zinc finger CCHC domain-containing protein 4 isoform X4

Nucleotide Protein
Heading Accession and Version

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