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TMCC1 transmembrane and coiled-coil domain family 1 [ Gavialis gangeticus (Gharial) ]

Gene ID: 109288917, updated on 14-Mar-2024

Summary

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Gene symbol
TMCC1
Gene description
transmembrane and coiled-coil domain family 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Gavialis gangeticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Longirostres; Gavialidae; Gavialinae; Gavialis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current GavGan_comp1 (GCF_001723915.1) Unplaced Scaffold NW_017728997.1 (572980..782119)

NW_017728997.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109288880 Neighboring gene thyrotropin releasing hormone Neighboring gene uncharacterized LOC109288881 Neighboring gene plexin D1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017728997.1 Unplaced Scaffold Reference GavGan_comp1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosome fission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosome membrane tubulation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane fission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane and coiled-coil domains protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gavialis gangeticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GavGan_comp1 Primary Assembly

Genomic

  1. NW_017728997.1 Reference GavGan_comp1 Primary Assembly

    Range
    572980..782119
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019504649.1 → XP_019360194.1  transmembrane and coiled-coil domains protein 1 isoform X2

  2. XM_019504648.1 → XP_019360193.1  transmembrane and coiled-coil domains protein 1 isoform X1

  3. XM_019504651.1 → XP_019360196.1  transmembrane and coiled-coil domains protein 1 isoform X4

  4. XM_019504654.1 → XP_019360199.1  transmembrane and coiled-coil domains protein 1 isoform X6

  5. XM_019504655.1 → XP_019360200.1  transmembrane and coiled-coil domains protein 1 isoform X7

  6. XM_019504652.1 → XP_019360197.1  transmembrane and coiled-coil domains protein 1 isoform X5

  7. XM_019504650.1 → XP_019360195.1  transmembrane and coiled-coil domains protein 1 isoform X3

Nucleotide Protein
Heading Accession and Version

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