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UROD uroporphyrinogen decarboxylase [ Alligator mississippiensis (American alligator) ]

Gene ID: 109283629, updated on 14-Mar-2024

Summary

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Gene symbol
UROD
Gene description
uroporphyrinogen decarboxylase
Locus tag
Y1Q_0003590
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 5 NC_081828.1 (2234441..2242331)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017707680.1 (23106..29841)

Chromosome 5 - NC_081828.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 2B subunit gamma Neighboring gene small nucleolar RNA SNORD38 Neighboring gene E3 ubiquitin-protein ligase HECTD3-like Neighboring gene E3 ubiquitin-protein ligase HECTD3 Neighboring gene zinc finger SWIM-type containing 5 Neighboring gene selenoprotein Pb-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables uroporphyrinogen decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heme biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uroporphyrinogen decarboxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081828.1 Reference rAllMis1 Primary Assembly

    Range
    2234441..2242331
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059727743.1 → XP_059583726.1  uroporphyrinogen decarboxylase isoform X2

  2. XM_059727742.1 → XP_059583725.1  uroporphyrinogen decarboxylase isoform X1

  3. XM_019489471.2 → XP_019345016.2  uroporphyrinogen decarboxylase isoform X4

  4. XM_019489464.2 → XP_019345009.2  uroporphyrinogen decarboxylase isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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