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Tsp_06531 domain protein, SNF2 family [ Trichinella spiralis ]

Gene ID: 10909224, updated on 28-Dec-2023

Summary

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Gene symbol
Tsp_06531
Gene description
domain protein, SNF2 family
Locus tag
Tsp_06531
Gene type
protein coding
RNA name
domain protein, SNF2 family
RefSeq status
PROVISIONAL
Organism
Trichinella spiralis (strain: ISS 195)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Trichocephalida; Trichinellidae; Trichinella
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Genomic context

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Location:
chromosome: Unknown
Exon count:
24

NW_003526943.1Genomic Context describing neighboring genes Neighboring gene DENN domain-containing protein 1B Neighboring gene ribosomal protein S7 Neighboring gene hypothetical protein Neighboring gene protein OS-9

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003526943.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The draft genome of the parasitic nematode Trichinella spiralis. Mitreva M, et al. Nat Genet, 2011 Mar. PMID 21336279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
domain protein, SNF2 family

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003526943.1 Reference assembly

    Range
    11268490..11275448
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003378522.1 → XP_003378570.1  domain protein, SNF2 family [Trichinella spiralis]

    See identical proteins and their annotated locations for XP_003378570.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0V1BSX0
    Conserved Domains (3) summary
    cd00046
    Location:471 → 636
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    pfam00176
    Location:454 → 793
    SNF2_N; SNF2 family N-terminal domain
    pfam00271
    Location:863 → 974
    Helicase_C; Helicase conserved C-terminal domain
Nucleotide Protein
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