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wdr54 WD repeat domain 54 [ Cyprinus carpio (common carp) ]

Gene ID: 109078810, updated on 14-Mar-2024

Summary

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Gene symbol
wdr54
Gene description
WD repeat domain 54
See related
Ensembl:ENSCCRG00000027837
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinus carpio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: A5
Exon count:
10
Annotation release Status Assembly Chr Location
101 current ASM1834038v1 (GCF_018340385.1) A5 NC_056576.1 (24767468..24772049)
100 previous assembly common carp genome (GCF_000951615.1) Unplaced Scaffold NW_017541840.1 (312530..317116, complement)

Chromosome A5 - NC_056576.1Genomic Context describing neighboring genes Neighboring gene aquaporin-3 Neighboring gene uncharacterized LOC122145150 Neighboring gene rho-related BTB domain-containing protein 1-like Neighboring gene drebrin-like protein B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cilium-dependent cell motility IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sperm axoneme assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD repeat-containing protein 54

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834038v1 Primary Assembly

Genomic

  1. NC_056576.1 Reference ASM1834038v1 Primary Assembly

    Range
    24767468..24772049
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042757355.1 → XP_042613289.1  WD repeat-containing protein 54

    UniProtKB/TrEMBL
    A0A8C1CRX8, A0A8C1IVY4, A0A8C2G6S5, A0A9Q9Y430
    Conserved Domains (2) summary
    sd00039
    Location:173 → 215
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:81 → 284
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_042757356.1 → XP_042613290.1  WD repeat-containing protein 54

    UniProtKB/TrEMBL
    A0A8C1CRX8, A0A8C1IVY4, A0A8C2G6S5, A0A9Q9Y430
    Conserved Domains (2) summary
    sd00039
    Location:173 → 215
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:81 → 284
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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