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Tsp_08578 potassium voltage-gated channel subfamily A member 1 [ Trichinella spiralis ]

Gene ID: 10907012, updated on 28-Dec-2023

Summary

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Gene symbol
Tsp_08578
Gene description
potassium voltage-gated channel subfamily A member 1
Locus tag
Tsp_08578
Gene type
protein coding
RNA name
potassium voltage-gated channel subfamily A member 1
RefSeq status
PROVISIONAL
Organism
Trichinella spiralis (strain: ISS 195)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Trichocephalida; Trichinellidae; Trichinella
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Genomic context

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Location:
chromosome: Unknown
Exon count:
2

NW_003526945.1Genomic Context describing neighboring genes Neighboring gene uracil-DNA glycosylase Neighboring gene protein henna Neighboring gene hypothetical protein Neighboring gene transcription factor HES-2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003526945.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The draft genome of the parasitic nematode Trichinella spiralis. Mitreva M, et al. Nat Genet, 2011 Mar. PMID 21336279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables delayed rectifier potassium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in potassium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein homooligomerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of voltage-gated potassium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
potassium voltage-gated channel subfamily A member 1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003526945.1 Reference assembly

    Range
    3381456..3386374 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003373803.1 → XP_003373851.1  potassium voltage-gated channel subfamily A member 1 [Trichinella spiralis]

    See identical proteins and their annotated locations for XP_003373851.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0V1BC31
    Conserved Domains (4) summary
    smart00225
    Location:100 → 190
    BTB; Broad-Complex, Tramtrack and Bric a brac
    pfam00520
    Location:276 → 466
    Ion_trans; Ion transport protein
    pfam02214
    Location:100 → 191
    BTB_2; BTB/POZ domain
    pfam07885
    Location:383 → 458
    Ion_trans_2; Ion channel
Nucleotide Protein
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