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Tsp_04044 secreted frizzled-related protein 1 [ Trichinella spiralis ]

Gene ID: 10904463, updated on 28-Dec-2023

Summary

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Gene symbol
Tsp_04044
Gene description
secreted frizzled-related protein 1
Locus tag
Tsp_04044
Gene type
protein coding
RNA name
secreted frizzled-related protein 1
RefSeq status
PROVISIONAL
Organism
Trichinella spiralis (strain: ISS 195)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Trichocephalida; Trichinellidae; Trichinella
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Genomic context

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Location:
chromosome: Unknown
Exon count:
5

NW_003526944.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene mesoderm development candidate 2 Neighboring gene 26S proteasome non-ATPase regulatory subunit 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003526944.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The draft genome of the parasitic nematode Trichinella spiralis. Mitreva M, et al. Nat Genet, 2011 Mar. PMID 21336279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Wnt-protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in non-canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
secreted frizzled-related protein 1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003526944.1 Reference assembly

    Range
    1680434..1683260
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003374810.1 → XP_003374858.1  secreted frizzled-related protein 1 [Trichinella spiralis]

    See identical proteins and their annotated locations for XP_003374858.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0V1BC23
    Conserved Domains (2) summary
    cl02447
    Location:49 → 162
    CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
    cl02512
    Location:171 → 261
    NTR_like; NTR_like domain; a beta barrel with an oligosaccharide/oligonucleotide-binding fold found in netrins, complement proteins, tissue inhibitors of metalloproteases (TIMP), and procollagen C-proteinase enhancers (PCOLCE), amongst others. In netrins, the ...
Nucleotide Protein
Heading Accession and Version

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