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Tsp_00837 ribosome biogenesis regulatory protein-like protein [ Trichinella spiralis ]

Gene ID: 10904451, updated on 28-Dec-2023

Summary

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Gene symbol
Tsp_00837
Gene description
ribosome biogenesis regulatory protein-like protein
Locus tag
Tsp_00837
Gene type
protein coding
RNA name
ribosome biogenesis regulatory protein-like protein
RefSeq status
PROVISIONAL
Organism
Trichinella spiralis (strain: ISS 195)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Trichocephalida; Trichinellidae; Trichinella
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Genomic context

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Location:
chromosome: Unknown
Exon count:
17

NW_003526943.1Genomic Context describing neighboring genes Neighboring gene DNA primase small subunit Neighboring gene putative N-chimaerin Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003526943.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The draft genome of the parasitic nematode Trichinella spiralis. Mitreva M, et al. Nat Genet, 2011 Mar. PMID 21336279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal large subunit biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal large subunit export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of preribosome, large subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
ribosome biogenesis regulatory protein-like protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003526943.1 Reference assembly

    Range
    3539588..3542931 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003376639.1 → XP_003376687.1  ribosome biogenesis regulatory protein-like protein [Trichinella spiralis]

    See identical proteins and their annotated locations for XP_003376687.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0V1C0U4
    Conserved Domains (1) summary
    pfam04939
    Location:20 → 178
    RRS1; Ribosome biogenesis regulatory protein (RRS1)
Nucleotide Protein
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