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Tsp_11575 GHMP kinases C superfamily [ Trichinella spiralis ]

Gene ID: 10903233, updated on 28-Dec-2023

Summary

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Gene symbol
Tsp_11575
Gene description
GHMP kinases C superfamily
Locus tag
Tsp_11575
Gene type
protein coding
RNA name
GHMP kinases C superfamily
RefSeq status
PROVISIONAL
Organism
Trichinella spiralis (strain: ISS 195)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Trichocephalida; Trichinellidae; Trichinella
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Genomic context

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Location:
chromosome: Unknown
Exon count:
9

NW_003526948.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene putative protein kinase domain protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003526948.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The draft genome of the parasitic nematode Trichinella spiralis. Mitreva M, et al. Nat Genet, 2011 Mar. PMID 21336279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables galactokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in galactose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
GHMP kinases C superfamily

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003526948.1 Reference assembly

    Range
    1735619..1738118
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003371440.1 → XP_003371488.1  GHMP kinases C superfamily [Trichinella spiralis]

    See identical proteins and their annotated locations for XP_003371488.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0V1BAF3
    Conserved Domains (3) summary
    COG0153
    Location:22 → 463
    GalK; Galactokinase [Carbohydrate transport and metabolism]
    pfam08544
    Location:371 → 441
    GHMP_kinases_C; GHMP kinases C terminal
    pfam10509
    Location:15 → 63
    GalKase_gal_bdg; Galactokinase galactose-binding signature
Nucleotide Protein
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