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Tsp_08923 ubiquitin-conjugating enzyme E2 [ Trichinella spiralis ]

Gene ID: 10902468, updated on 25-Jan-2024

Summary

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Gene symbol
Tsp_08923
Gene description
ubiquitin-conjugating enzyme E2
Locus tag
Tsp_08923
Gene type
protein coding
RNA name
ubiquitin-conjugating enzyme E2
RefSeq status
PROVISIONAL
Organism
Trichinella spiralis (strain: ISS 195)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Trichocephalida; Trichinellidae; Trichinella
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Genomic context

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Location:
chromosome: Unknown
Exon count:
6

NW_003526940.1Genomic Context describing neighboring genes Neighboring gene putative COP9 signalosome complex subunit 1 Neighboring gene ParA family protein Neighboring gene deoxyribonuclease II family protein Neighboring gene DNA-directed RNA polymerase III subunit RPC2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003526940.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The draft genome of the parasitic nematode Trichinella spiralis. Mitreva M, et al. Nat Genet, 2011 Mar. PMID 21336279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin conjugating enzyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of HULC complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
ubiquitin-conjugating enzyme E2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003526940.1 Reference assembly

    Range
    2417328..2419461 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003382018.1 → XP_003382066.1  ubiquitin-conjugating enzyme E2 [Trichinella spiralis]

    See identical proteins and their annotated locations for XP_003382066.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E5S003
    Conserved Domains (2) summary
    COG5078
    Location:123 → 258
    COG5078; Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
    pfam00179
    Location:122 → 252
    UQ_con; Ubiquitin-conjugating enzyme
Nucleotide Protein
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