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Tsp_12984 vacuolar protein sorting-associated protein 52-like protein [ Trichinella spiralis ]

Gene ID: 10899750, updated on 28-Dec-2023

Summary

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Gene symbol
Tsp_12984
Gene description
vacuolar protein sorting-associated protein 52-like protein
Locus tag
Tsp_12984
Gene type
protein coding
RNA name
vacuolar protein sorting-associated protein 52-like protein
RefSeq status
PROVISIONAL
Organism
Trichinella spiralis (strain: ISS 195)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Trichocephalida; Trichinellidae; Trichinella
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Genomic context

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Location:
chromosome: Unknown
Exon count:
12

NW_003533387.1Genomic Context describing neighboring genes Neighboring gene cytochrome b5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003533387.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The draft genome of the parasitic nematode Trichinella spiralis. Mitreva M, et al. Nat Genet, 2011 Mar. PMID 21336279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables syntaxin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi to vacuole transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endocytic recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lysosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde transport, endosome to Golgi IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of GARP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
vacuolar protein sorting-associated protein 52-like protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003533387.1 Reference assembly

    Range
    613..3600 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003366165.1 → XP_003366213.1  vacuolar protein sorting-associated protein 52-like protein [Trichinella spiralis]

    See identical proteins and their annotated locations for XP_003366213.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E5T156
    Conserved Domains (2) summary
    pfam14800
    Location:138 → 251
    DUF4481; Domain of unknown function (DUF4481)
    cl19950
    Location:428 → 569
    Sec3_C; Exocyst complex component Sec3
Nucleotide Protein
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