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Tsp_10882 calcium-activated BK potassium channel alpha subunit superfamily [ Trichinella spiralis ]

Gene ID: 10897250, updated on 28-Dec-2023

Summary

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Gene symbol
Tsp_10882
Gene description
calcium-activated BK potassium channel alpha subunit superfamily
Locus tag
Tsp_10882
Gene type
protein coding
RNA name
calcium-activated BK potassium channel alpha subunit superfamily
RefSeq status
PROVISIONAL
Organism
Trichinella spiralis (strain: ISS 195)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Trichocephalida; Trichinellidae; Trichinella
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Genomic context

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Location:
chromosome: Unknown
Exon count:
22

NW_003528024.1Genomic Context describing neighboring genes Neighboring gene calcium-activated potassium channel slo-1 Neighboring gene calcium-activated potassium channel slo-1 Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003528024.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The draft genome of the parasitic nematode Trichinella spiralis. Mitreva M, et al. Nat Genet, 2011 Mar. PMID 21336279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables large conductance calcium-activated potassium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in potassium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
calcium-activated BK potassium channel alpha subunit superfamily

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003528024.1 Reference assembly

    Range
    310492..317221 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003370225.1 → XP_003370273.1  calcium-activated BK potassium channel alpha subunit superfamily [Trichinella spiralis]

    See identical proteins and their annotated locations for XP_003370273.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0V1B123
    Conserved Domains (3) summary
    pfam00520
    Location:36 → 221
    Ion_trans; Ion transport protein
    pfam03493
    Location:333 → 414
    BK_channel_a; Calcium-activated BK potassium channel alpha subunit
    pfam07885
    Location:156 → 216
    Ion_trans_2; Ion channel
Nucleotide Protein
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