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spag9b sperm associated antigen 9b [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108940063, updated on 14-Mar-2024

Summary

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Gene symbol
spag9b
Gene description
sperm associated antigen 9b
See related
Ensembl:ENSSFOG00015022470
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
Also known as
spag9
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 20
Exon count:
32
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 20 NC_041825.1 (13477704..13536939)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017372119.1 (1346029..1405251)

Chromosome 20 - NC_041825.1Genomic Context describing neighboring genes Neighboring gene KDEL endoplasmic reticulum protein retention receptor 2b Neighboring gene diacylglycerol lipase, beta Neighboring gene transducer of ERBB2, 1b Neighboring gene uncharacterized LOC108939994

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables JUN kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables MAP-kinase scaffold activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables kinesin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor complex adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-Jun-amino-terminal kinase-interacting protein 4
Names
sperm associated antigen 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041825.1 Reference fSclFor1.1 Primary Assembly

    Range
    13477704..13536939
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029246572.1 → XP_029102405.1  C-Jun-amino-terminal kinase-interacting protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A8D0CEH4
    Conserved Domains (3) summary
    COG1196
    Location:28 → 566
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam16471
    Location:420 → 475
    JIP_LZII; JNK-interacting protein leucine zipper II
    pfam09744
    Location:24 → 177
    Jnk-SapK_ap_N; JNK_SAPK-associated protein-1

  2. XM_018761898.2 → XP_018617414.1  C-Jun-amino-terminal kinase-interacting protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A8D0CEH4
    Related
    ENSSFOP00015066165.1, ENSSFOT00015060188.1

  3. XM_029246573.1 → XP_029102406.1  C-Jun-amino-terminal kinase-interacting protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A8C9V9H7
    Conserved Domains (3) summary
    COG1196
    Location:28 → 537
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam16471
    Location:391 → 446
    JIP_LZII; JNK-interacting protein leucine zipper II
    pfam09744
    Location:24 → 177
    Jnk-SapK_ap_N; JNK_SAPK-associated protein-1

  4. XM_018761897.2 → XP_018617413.1  C-Jun-amino-terminal kinase-interacting protein 4 isoform X4

    UniProtKB/TrEMBL
    A0A8C9V9H7
    Related
    ENSSFOP00015035307.2, ENSSFOT00015035693.2

  5. XM_029246574.1 → XP_029102407.1  C-Jun-amino-terminal kinase-interacting protein 4 isoform X5

    UniProtKB/TrEMBL
    A0A0P7VG81
    Conserved Domains (2) summary
    pfam16471
    Location:249 → 304
    JIP_LZII; JNK-interacting protein leucine zipper II
    pfam17380
    Location:247 → 395
    DUF5401; Family of unknown function (DUF5401)

  6. XM_029246575.1 → XP_029102408.1  C-Jun-amino-terminal kinase-interacting protein 4 isoform X6

    UniProtKB/TrEMBL
    A0A0P7VG81
    Conserved Domains (2) summary
    COG1196
    Location:165 → 395
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam16471
    Location:249 → 304
    JIP_LZII; JNK-interacting protein leucine zipper II
Nucleotide Protein
Heading Accession and Version

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