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LOC108929549 alpha-synuclein [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108929549, updated on 22-Oct-2023

Summary

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Gene symbol
LOC108929549
Gene description
alpha-synuclein
See related
Ensembl:ENSSFOG00015010103
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
Also known as
snca
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Genomic context

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Location:
chromosome: 12
Exon count:
7
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 12 NC_041817.1 (12146218..12156109, complement)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371619.1 (156055..165954)

Chromosome 12 - NC_041817.1Genomic Context describing neighboring genes Neighboring gene major facilitator superfamily domain containing 10 Neighboring gene vimentin-like Neighboring gene multimerin 1 Neighboring gene cilia and flagella associated protein 91

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cuprous ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of dopamine secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic vesicle endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon terminus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuronal cell body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-synuclein
Names
synuclein alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041817.1 Reference fSclFor1.1 Primary Assembly

    Range
    12146218..12156109 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018744172.2 → XP_018599688.1  alpha-synuclein isoform X2

    UniProtKB/TrEMBL
    A0A0P7UHV6, A0A8C9RMS0
    Related
    ENSSFOP00015015665.2, ENSSFOT00015015847.2

  2. XM_018744173.2 → XP_018599689.1  alpha-synuclein isoform X3

    UniProtKB/TrEMBL
    A0A0P7UHV6, A0A8C9RFM7
    Related
    ENSSFOP00015015676.1, ENSSFOT00015015858.2

  3. XM_018744170.2 → XP_018599686.1  alpha-synuclein isoform X1

    UniProtKB/TrEMBL
    A0A0P7UHV6
    Conserved Domains (1) summary
    pfam01387
    Location:1 → 101
    Synuclein

  4. XM_018744171.2 → XP_018599687.1  alpha-synuclein isoform X1

    UniProtKB/TrEMBL
    A0A0P7UHV6
    Conserved Domains (1) summary
    pfam01387
    Location:1 → 101
    Synuclein

  5. XM_018744169.2 → XP_018599685.1  alpha-synuclein isoform X1

    UniProtKB/TrEMBL
    A0A0P7UHV6
    Conserved Domains (1) summary
    pfam01387
    Location:1 → 101
    Synuclein

  6. XM_029256962.1 → XP_029112795.1  alpha-synuclein isoform X1

    UniProtKB/TrEMBL
    A0A0P7UHV6
    Conserved Domains (1) summary
    pfam01387
    Location:1 → 101
    Synuclein
Nucleotide Protein
Heading Accession and Version

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