U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

hif1aa hypoxia inducible factor 1 subunit alpha a [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108919562, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
hif1aa
Gene description
hypoxia inducible factor 1 subunit alpha a
See related
Ensembl:ENSSFOG00015013206
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
Also known as
hif1a
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 15
Exon count:
15
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 15 NC_041820.1 (17723529..17736631)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017372338.1 (4667819..4681170)

Chromosome 15 - NC_041820.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 38 member 6 Neighboring gene protein kinase C, eta, a Neighboring gene small nuclear RNA activating complex, polypeptide 1b Neighboring gene synaptotagmin XVI

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to hypoxia IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
hypoxia-inducible factor 1-alpha
Names
hypoxia inducible factor 1 alpha subunit

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041820.1 Reference fSclFor1.1 Primary Assembly

    Range
    17723529..17736631
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018727619.2 → XP_018583135.1  hypoxia-inducible factor 1-alpha

    UniProtKB/TrEMBL
    A0A0P7YFP3, A0A8C9RUJ9
    Related
    ENSSFOP00015020566.1, ENSSFOT00015020797.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.