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derl1 derlin 1 [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108919303, updated on 14-Mar-2024

Summary

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Gene symbol
derl1
Gene description
derlin 1
See related
Ensembl:ENSSFOG00015000474
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 23
Exon count:
8
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 23 NC_041828.1 (18602489..18611567, complement)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017372329.1 (6672..15803)

Chromosome 23 - NC_041828.1Genomic Context describing neighboring genes Neighboring gene collagen alpha-1(XIV) chain-like Neighboring gene zinc fingers and homeoboxes protein 2-like Neighboring gene zinc fingers and homeoboxes protein 1-like Neighboring gene N-terminal glutamine amidase 1 Neighboring gene proteasome 20S subunit alpha 2b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables misfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-specific protease binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum unfolded protein response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Hrd1p ubiquitin ligase ERAD-L complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
derlin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041828.1 Reference fSclFor1.1 Primary Assembly

    Range
    18602489..18611567 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018727205.2 → XP_018582721.1  derlin-1

    UniProtKB/TrEMBL
    A0A0P7WSD9, A0A8C9QV12
    Related
    ENSSFOP00015000619.2, ENSSFOT00015000647.2
Nucleotide Protein
Heading Accession and Version

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