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ralgapa2 Ral GTPase activating protein catalytic subunit alpha 2 [ Lates calcarifer (barramundi perch) ]

Gene ID: 108897971, updated on 1-Aug-2024

Summary

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Gene symbol
ralgapa2
Gene description
Ral GTPase activating protein catalytic subunit alpha 2
See related
EnsemblRapid:ENSLCAG00010013140
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG19
Exon count:
43
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG19 NC_066851.1 (7774366..7859837, complement)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017365930.1 (816723..902184, complement)

Linkage Group LG19 - NC_066851.1Genomic Context describing neighboring genes Neighboring gene kazal-type serine protease inhibitor domain-containing protein 1 Neighboring gene insulinoma-associated 1b Neighboring gene uncharacterized LOC108897997 Neighboring gene kizuna centrosomal protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Kuznetsova IS, et al. Front Genet, 2014. PMID 25120555, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of small GTPase mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ral GTPase-activating protein subunit alpha-2
Names
Ral GTPase activating protein catalytic alpha subunit 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066851.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    7774366..7859837 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051078029.1 → XP_050933986.1  ral GTPase-activating protein subunit alpha-2 isoform X6

    UniProtKB/TrEMBL
    A0A4W6DX46, A0AAJ8DWD9

  2. XM_018697787.2 → XP_018553303.1  ral GTPase-activating protein subunit alpha-2 isoform X5

    UniProtKB/TrEMBL
    A0A4W6DX46, A0AAJ7QDI8
    Related
    ENSLCAP00010029710.2, ENSLCAT00010030368.2

  3. XM_051078028.1 → XP_050933985.1  ral GTPase-activating protein subunit alpha-2 isoform X4

    UniProtKB/TrEMBL
    A0A4W6DX46, A0AAJ8BK19
    Related
    ENSLCAP00010029722.2, ENSLCAT00010030379.2

  4. XM_018697789.2 → XP_018553305.1  ral GTPase-activating protein subunit alpha-2 isoform X1

    UniProtKB/TrEMBL
    A0A4W6DX46, A0AAJ7QDG2
    Related
    ENSLCAP00010029521.1, ENSLCAT00010030175.2

  5. XM_051078027.1 → XP_050933984.1  ral GTPase-activating protein subunit alpha-2 isoform X3

    UniProtKB/TrEMBL
    A0A4W6DX46, A0AAJ8BLM1
    Related
    ENSLCAP00010029623.2, ENSLCAT00010030277.2

  6. XM_051078026.1 → XP_050933983.1  ral GTPase-activating protein subunit alpha-2 isoform X2

    UniProtKB/TrEMBL
    A0A4W6DX46, A0AAJ8BLV4
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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