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trnaw-cca transfer RNA tryptophan (anticodon CCA) [ Lates calcarifer (barramundi perch) ]

Gene ID: 108896069, updated on 6-Mar-2023

Summary

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Gene symbol
trnaw-cca
Gene description
transfer RNA tryptophan (anticodon CCA)
Gene type
tRNA
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
Summary
This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104).
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Genomic context

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Location:
chromosome: LG20
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG20 NC_066852.1 (180082..180153)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017365708.1 (209700..209771, complement)

Linkage Group LG20 - NC_066852.1Genomic Context describing neighboring genes Neighboring gene ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene neutrophil cytosolic factor 1 Neighboring gene NACHT, LRR and PYD domains-containing protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066852.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    180082..180153
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    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
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