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ext2 exostosin glycosyltransferase 2 [ Lates calcarifer (barramundi perch) ]

Gene ID: 108889668, updated on 1-Aug-2024

Summary

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Gene symbol
ext2
Gene description
exostosin glycosyltransferase 2
See related
EnsemblRapid:ENSLCAG00010008624
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG2
Exon count:
15
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG2 NC_066834.1 (2623954..2642922, complement)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017364447.1 (430067..449031)

Linkage Group LG2 - NC_066834.1Genomic Context describing neighboring genes Neighboring gene cell cycle associated protein 1a Neighboring gene homeobox protein aristaless-like 4 Neighboring gene diacylglycerol lipase, alpha Neighboring gene uncharacterized LOC108889661

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Kuznetsova IS, et al. Front Genet, 2014. PMID 25120555, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exostosin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066834.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    2623954..2642922 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018686260.2 → XP_018541776.1  exostosin-2

    UniProtKB/TrEMBL
    A0A4W6D0Z7, A0AAJ7PYH6
    Related
    ENSLCAP00010075794.1, ENSLCAT00010071644.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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