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mrasa muscle RAS oncogene homolog a [ Lates calcarifer (barramundi perch) ]

Gene ID: 108887106, updated on 10-Apr-2024

Summary

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Gene symbol
mrasa
Gene description
muscle RAS oncogene homolog a
See related
EnsemblRapid:ENSLCAG00010028080
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
Also known as
mras; si:ch73-116o1.2
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Genomic context

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Location:
chromosome: LG1
Exon count:
6
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG1 NC_066833.1 (10429614..10444658, complement)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017364097.1 (732287..747350, complement)

Linkage Group LG1 - NC_066833.1Genomic Context describing neighboring genes Neighboring gene polycystic kidney disease protein 1-like 2 Neighboring gene polycystic kidney disease protein 1-like 2 Neighboring gene parathyroid hormone 2 receptor a Neighboring gene transmembrane protein 177 Neighboring gene protein tyrosine phosphatase non-receptor type 4a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Immune transcriptome reveals the mincle C-type lectin receptor acts as a partial replacement for TLR4 in lipopolysaccharide-mediated inflammatory response in barramundi (Lates calcarifer). Zoccola E, et al. Mol Immunol, 2017 Mar. PMID 28095348
  2. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Kuznetsova IS, et al. Front Genet, 2014. PMID 25120555, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein M-Ras

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066833.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    10429614..10444658 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018682289.2 → XP_018537805.1  ras-related protein M-Ras

    UniProtKB/TrEMBL
    A0A4W6G9T2, A0A4W6GA89
    Related
    ENSLCAP00010060360.2, ENSLCAT00010061980.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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