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cdkn1bb cyclin dependent kinase inhibitor 1Bb [ Lates calcarifer (barramundi perch) ]

Gene ID: 108883075, updated on 10-Apr-2024

Summary

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Gene symbol
cdkn1bb
Gene description
cyclin dependent kinase inhibitor 1Bb
See related
EnsemblRapid:ENSLCAG00010007928
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
Also known as
cdkn1b
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: LG10
Exon count:
3
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG10 NC_066842.1 (7042431..7046781)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017363883.1 (2134271..2138629)

Linkage Group LG10 - NC_066842.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108883076 Neighboring gene tyrosyl-tRNA synthetase 2, mitochondrial Neighboring gene potassium voltage-gated channel, KQT-like subfamily, member 1.2 Neighboring gene uncharacterized LOC127142887 Neighboring gene mitochondrial ribosomal protein S35

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Immune transcriptome reveals the mincle C-type lectin receptor acts as a partial replacement for TLR4 in lipopolysaccharide-mediated inflammatory response in barramundi (Lates calcarifer). Zoccola E, et al. Mol Immunol, 2017 Mar. PMID 28095348
  2. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Kuznetsova IS, et al. Front Genet, 2014. PMID 25120555, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cyclin-dependent protein serine/threonine kinase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein-folding chaperone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G1/S transition of mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclin-dependent kinase inhibitor 1Bb
Names
cyclin dependent kinase inhibitor 1B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066842.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    7042431..7046781
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018675949.2 → XP_018531465.1  cyclin-dependent kinase inhibitor 1Bb

    UniProtKB/TrEMBL
    A0A4W6CWB2
    Related
    ENSLCAP00010016684.1, ENSLCAT00010017043.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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