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mansc1 MANSC domain containing 1 [ Lates calcarifer (barramundi perch) ]

Gene ID: 108882408, updated on 1-Aug-2024

Summary

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Gene symbol
mansc1
Gene description
MANSC domain containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG18
Exon count:
6
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG18 NC_066850.1 (562873..572250)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017363878.1 (244127..253436, complement)

Linkage Group LG18 - NC_066850.1Genomic Context describing neighboring genes Neighboring gene parathyroid hormone-like hormone a Neighboring gene transfer RNA threonine (anticodon UGU) Neighboring gene linkage group 18 C11orf98 homolog Neighboring gene uncharacterized LOC108882410 Neighboring gene low density lipoprotein receptor-related protein 6 Neighboring gene TANK-binding kinase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Kuznetsova IS, et al. Front Genet, 2014. PMID 25120555, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
MANSC domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066850.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    562873..572250
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051077762.1 → XP_050933719.1  MANSC domain-containing protein 1

    UniProtKB/TrEMBL
    A0A4W6F3Y3, A0AAJ8DW63

  2. XM_051077761.1 → XP_050933718.1  MANSC domain-containing protein 1

    UniProtKB/TrEMBL
    A0A4W6F3Y3, A0AAJ8DW63
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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