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borcs8 BLOC-1 related complex subunit 8 [ Lates calcarifer (barramundi perch) ]

Gene ID: 108879138, updated on 1-Aug-2024

Summary

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Gene symbol
borcs8
Gene description
BLOC-1 related complex subunit 8
See related
EnsemblRapid:ENSLCAG00010010369
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG17
Exon count:
6
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG17 NC_066849.1 (8361074..8366003)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017367227.1 (2246992..2251900)

Linkage Group LG17 - NC_066849.1Genomic Context describing neighboring genes Neighboring gene neurocan b Neighboring gene nuclear receptor 2C2-associated protein Neighboring gene regulatory factor X-associated ankyrin-containing protein Neighboring gene transmembrane protein 221 Neighboring gene myocyte enhancer factor 2b Neighboring gene transmembrane protein 161A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Kuznetsova IS, et al. Front Genet, 2014. PMID 25120555, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of BORC complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BLOC-1-related complex subunit 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066849.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    8361074..8366003
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018670325.2 → XP_018525841.1  BLOC-1-related complex subunit 8 isoform X1

    UniProtKB/TrEMBL
    A0A4W6DBA6, A0A4W6DBC0
    Related
    ENSLCAP00010022003.1, ENSLCAT00010022476.2

  2. XM_018670327.2 → XP_018525843.1  BLOC-1-related complex subunit 8 isoform X3

    UniProtKB/TrEMBL
    A0A4W6DBC0, A0AAJ7LMF7

  3. XM_018670326.2 → XP_018525842.1  BLOC-1-related complex subunit 8 isoform X2

    UniProtKB/TrEMBL
    A0A4W6DA53, A0A4W6DBC0
    Related
    ENSLCAP00010022009.1, ENSLCAT00010022482.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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