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ehmt1a euchromatic histone-lysine N-methyltransferase 1a [ Lates calcarifer (barramundi perch) ]

Gene ID: 108878664, updated on 1-Aug-2024

Summary

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Gene symbol
ehmt1a
Gene description
euchromatic histone-lysine N-methyltransferase 1a
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
Also known as
ehmt1
Orthologs
zebrafish all
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Genomic context

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See ehmt1a in Genome Data Viewer
Location:
chromosome: LG13
Exon count:
23
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG13 NC_066845.1 (22290160..22314064)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017367222.1 (1821049..1845216, complement)

Linkage Group LG13 - NC_066845.1Genomic Context describing neighboring genes Neighboring gene P2Y purinoceptor 2 Neighboring gene arrestin domain containing 1a Neighboring gene calcium channel, voltage-dependent, N type, alpha 1B subunit, a Neighboring gene uncharacterized LOC127143183 Neighboring gene patatin-like phospholipase domain containing 7b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Kuznetsova IS, et al. Front Genet, 2014. PMID 25120555, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables p53 binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein-lysine N-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone-lysine N-methyltransferase EHMT1a
Names
euchromatic histone lysine methyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066845.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    22290160..22314064
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051075131.1 → XP_050931088.1  histone-lysine N-methyltransferase EHMT1a

    UniProtKB/TrEMBL
    A0AAJ8BEM0

  2. XM_051075130.1 → XP_050931087.1  histone-lysine N-methyltransferase EHMT1a

    UniProtKB/TrEMBL
    A0AAJ8BEM0
Nucleotide Protein
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