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STAG2 STAG2 cohesin complex component [ Lepidothrix coronata (blue-crowned manakin) ]

Gene ID: 108498959, updated on 3-Aug-2024

Summary

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Gene symbol
STAG2
Gene description
STAG2 cohesin complex component
See related
Ensembl:ENSLCOG00000015759
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepidothrix coronata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Lepidothrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
34
Annotation release Status Assembly Chr Location
100 current Lepidothrix_coronata-1.0 (GCF_001604755.1) Unplaced Scaffold NW_016690182.1 (3177922..3247917, complement)

NW_016690182.1Genomic Context describing neighboring genes Neighboring gene teneurin transmembrane protein 1 Neighboring gene SH2 domain containing 1A Neighboring gene X-linked inhibitor of apoptosis Neighboring gene THO complex 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016690182.1 Unplaced Scaffold Reference Lepidothrix_coronata-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sister chromatid cohesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of cohesin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cohesin subunit SA-2
Names
stromal antigen 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepidothrix coronata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lepidothrix_coronata-1.0

Genomic

  1. NW_016690182.1 Reference Lepidothrix_coronata-1.0

    Range
    3177922..3247917 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017818314.1 → XP_017673803.1  cohesin subunit SA-2 isoform X2

    UniProtKB/TrEMBL
    A0A6J0HGV5

  2. XM_017818305.1 → XP_017673794.1  cohesin subunit SA-2 isoform X1

    UniProtKB/TrEMBL
    A0A6J0HJM5
    Conserved Domains (1) summary
    pfam08514
    Location:156 → 264
    STAG; STAG domain

  3. XM_017818323.1 → XP_017673812.1  cohesin subunit SA-2 isoform X3

    UniProtKB/TrEMBL
    A0A6J0HH37
    Related
    ENSLCOP00000022385.1, ENSLCOT00000023655.1
    Conserved Domains (1) summary
    pfam08514
    Location:156 → 264
    STAG; STAG domain
Nucleotide Protein
Heading Accession and Version

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