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YY1 YY1 transcription factor [ Lepidothrix coronata (blue-crowned manakin) ]

Gene ID: 108493756, updated on 3-Aug-2024

Summary

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Gene symbol
YY1
Gene description
YY1 transcription factor
See related
Ensembl:ENSLCOG00000009604
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepidothrix coronata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Lepidothrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Lepidothrix_coronata-1.0 (GCF_001604755.1) Unplaced Scaffold NW_016690199.1 (6846361..6871724, complement)

NW_016690199.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 47 Neighboring gene solute carrier family 25 member 29 Neighboring gene delta 4-desaturase, sphingolipid 2 Neighboring gene Enah/Vasp-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016690199.1 Unplaced Scaffold Reference Lepidothrix_coronata-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PcG protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcriptional repressor protein YY1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepidothrix coronata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lepidothrix_coronata-1.0

Genomic

  1. NW_016690199.1 Reference Lepidothrix_coronata-1.0

    Range
    6846361..6871724 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017807474.1 → XP_017662963.1  transcriptional repressor protein YY1

    UniProtKB/TrEMBL
    A0A6J0GLX9
    Related
    ENSLCOP00000013311.1, ENSLCOT00000014093.1
    Conserved Domains (2) summary
    COG5048
    Location:274 → 413
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:333 → 353
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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