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PLXNC1 plexin C1 [ Lepidothrix coronata (blue-crowned manakin) ]

Gene ID: 108492308, updated on 3-Aug-2024

Summary

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Gene symbol
PLXNC1
Gene description
plexin C1
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepidothrix coronata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Lepidothrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
100 current Lepidothrix_coronata-1.0 (GCF_001604755.1) Unplaced Scaffold NW_016690189.1 (7875759..7946887)

NW_016690189.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108492286 Neighboring gene suppressor of cytokine signaling 2 Neighboring gene CASP2 and RIPK1 domain containing adaptor with death domain Neighboring gene dynein light chain Tctex-type 3 pseudogene Neighboring gene centrosomal protein 83 Neighboring gene transmembrane and coiled-coil domain family 3 Neighboring gene NADH:ubiquinone oxidoreductase subunit A12

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016690189.1 Unplaced Scaffold Reference Lepidothrix_coronata-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables semaphorin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell shape IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in semaphorin-plexin signaling pathway involved in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of semaphorin receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plexin-C1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepidothrix coronata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lepidothrix_coronata-1.0

Genomic

  1. NW_016690189.1 Reference Lepidothrix_coronata-1.0

    Range
    7875759..7946887
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017804511.1 → XP_017660000.1  plexin-C1

    UniProtKB/TrEMBL
    A0A6J0GDE4
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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