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trabd2a TraB domain containing 2A [ Pygocentrus nattereri (red-bellied piranha) ]

Gene ID: 108439149, updated on 12-Sep-2024

Summary

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Gene symbol
trabd2a
Gene description
TraB domain containing 2A
See related
Ensembl:ENSPNAG00000013117
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygocentrus nattereri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Pygocentrus
Orthologs
zebrafish all
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Genomic context

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See trabd2a in Genome Data Viewer
Location:
chromosome: 23
Exon count:
7
Annotation release Status Assembly Chr Location
101 current fPygNat1.pri (GCF_015220715.1) 23 NC_051233.1 (3213298..3287908, complement)
100 previous assembly Pygocentrus_nattereri-1.0.2 (GCF_001682695.1) Unplaced Scaffold NW_016244051.1 (298947..387853, complement)

Chromosome 23 - NC_051233.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 170 Neighboring gene hook microtubule-tethering protein 3 Neighboring gene DCC netrin 1 receptor Neighboring gene elastase-1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
metalloprotease TIKI1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygocentrus nattereri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPygNat1.pri

Genomic

  1. NC_051233.1 Reference fPygNat1.pri

    Range
    3213298..3287908 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017717396.2 → XP_017572885.2  metalloprotease TIKI1

    UniProtKB/TrEMBL
    A0A3B4C7U5
    Related
    ENSPNAP00000007245.2, ENSPNAT00000002170.2
    Conserved Domains (1) summary
    cd14789
    Location:43 → 349
    Tiki; Tiki homology domain antagonizes Wnt function via cleavage of amino-terminal residues
Nucleotide Protein
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