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abi1a abl-interactor 1a [ Pygocentrus nattereri (red-bellied piranha) ]

Gene ID: 108431901, updated on 18-Jun-2024

Summary

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Gene symbol
abi1a
Gene description
abl-interactor 1a
See related
Ensembl:ENSPNAG00000029906
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygocentrus nattereri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Pygocentrus
Also known as
abi1
Orthologs
human zebrafish all
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Genomic context

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See abi1a in Genome Data Viewer
Location:
chromosome: 3
Exon count:
12
Annotation release Status Assembly Chr Location
101 current fPygNat1.pri (GCF_015220715.1) 3 NC_051213.1 (8177882..8282253, complement)
100 previous assembly Pygocentrus_nattereri-1.0.2 (GCF_001682695.1) Unplaced Scaffold NW_016243759.1 (6382388..6483828)

Chromosome 3 - NC_051213.1Genomic Context describing neighboring genes Neighboring gene amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein Neighboring gene protein adenylyltransferase SelO-like Neighboring gene uncharacterized LOC119263076 Neighboring gene prenyl (decaprenyl) diphosphate synthase, subunit 1 Neighboring gene acyl-CoA binding domain containing 5a Neighboring gene microtubule associated serine/threonine kinase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SH3 domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
abl interactor 1a
Names
abl interactor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygocentrus nattereri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPygNat1.pri

Genomic

  1. NC_051213.1 Reference fPygNat1.pri

    Range
    8177882..8282253 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017705379.2 → XP_017560868.1  abl interactor 1a isoform X2

    UniProtKB/TrEMBL
    A0A3B4DHV9

  2. XM_017705398.2 → XP_017560887.1  abl interactor 1a isoform X4

    UniProtKB/TrEMBL
    A0A3B4DHV9

  3. XM_017705370.2 → XP_017560859.1  abl interactor 1a isoform X1

    UniProtKB/TrEMBL
    A0A3B4DHV9

  4. XM_037536926.1 → XP_037392823.1  abl interactor 1a isoform X7

    UniProtKB/TrEMBL
    A0A3B4DHV9
    Conserved Domains (2) summary
    cd11971
    Location:402 → 460
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam07815
    Location:93 → 156
    Abi_HHR; Abl-interactor HHR

  5. XM_017705406.2 → XP_017560895.1  abl interactor 1a isoform X5

    UniProtKB/TrEMBL
    A0A3B4DHV9
    Related
    ENSPNAP00000076160.1, ENSPNAT00000078533.1

  6. XM_017705414.2 → XP_017560903.1  abl interactor 1a isoform X6

    UniProtKB/TrEMBL
    A0A3B4DHV9

  7. XM_017705389.2 → XP_017560878.1  abl interactor 1a isoform X3

    UniProtKB/TrEMBL
    A0A3B4DHV9
Nucleotide Protein
Heading Accession and Version

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