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vwde von Willebrand factor D and EGF domains [ Pygocentrus nattereri (red-bellied piranha) ]

Gene ID: 108426916, updated on 14-Mar-2024

Summary

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Gene symbol
vwde
Gene description
von Willebrand factor D and EGF domains
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygocentrus nattereri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Pygocentrus
Also known as
vwdel
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 17
Exon count:
32
Annotation release Status Assembly Chr Location
101 current fPygNat1.pri (GCF_015220715.1) 17 NC_051227.1 (24774301..24803669, complement)
100 previous assembly Pygocentrus_nattereri-1.0.2 (GCF_001682695.1) Unplaced Scaffold NW_016243801.1 (3853098..3882341)

Chromosome 17 - NC_051227.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 106Ba Neighboring gene Schwann cell-specific EGF-like repeat autocrine factor Neighboring gene uncharacterized LOC108426915 Neighboring gene ADP-ribosylation factor-like 4aa

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
von Willebrand factor D and EGF domain-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygocentrus nattereri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPygNat1.pri

Genomic

  1. NC_051227.1 Reference fPygNat1.pri

    Range
    24774301..24803669 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017696730.2 → XP_017552219.2  von Willebrand factor D and EGF domain-containing protein

    Conserved Domains (2) summary
    cd00054
    Location:1117 → 1152
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cl02516
    Location:413 → 569
    VWD; von Willebrand factor type D domain
Nucleotide Protein
Heading Accession and Version

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