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CX3CR1 C-X3-C motif chemokine receptor 1 [ Manis javanica (Malayan pangolin) ]

Gene ID: 108406917, updated on 14-Mar-2024

Summary

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Gene symbol
CX3CR1
Gene description
C-X3-C motif chemokine receptor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023435991.1 (9722995..9738224, complement)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016542616.1 (89942..150208)

NW_023435991.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118971678 Neighboring gene uncharacterized LOC108406922 Neighboring gene xin actin binding repeat containing 1 Neighboring gene golgi reassembly stacking protein 1 Neighboring gene WD repeat domain 48

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables C-X3-C chemokine receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CX3C chemokine receptor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023435991.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    9722995..9738224 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017675930.2 → XP_017531419.2  CX3C chemokine receptor 1 isoform X2

    Conserved Domains (2) summary
    cd14964
    Location:33 → 60
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:33 → 305
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

  2. XM_017675928.2 → XP_017531417.2  CX3C chemokine receptor 1 isoform X2

    Conserved Domains (2) summary
    cd14964
    Location:33 → 60
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:33 → 305
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

  3. XM_037014379.1 → XP_036870274.1  CX3C chemokine receptor 1 isoform X1

    Conserved Domains (2) summary
    cd14964
    Location:80 → 107
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:80 → 352
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
Nucleotide Protein
Heading Accession and Version

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