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APBA2 amyloid beta precursor protein binding family A member 2 [ Manis javanica (Malayan pangolin) ]

Gene ID: 108390061, updated on 14-Mar-2024

Summary

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Gene symbol
APBA2
Gene description
amyloid beta precursor protein binding family A member 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023436205.1 (2264408..2497076, complement)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016528665.1 (68261..181584)

NW_023436205.1Genomic Context describing neighboring genes Neighboring gene endosomal transmembrane epsin interactor 2 Neighboring gene guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5-like Neighboring gene NSE3 homolog, SMC5-SMC6 complex component Neighboring gene uncharacterized LOC118968742 Neighboring gene uncharacterized LOC108396843 Neighboring gene M-phase phosphoprotein 10 Neighboring gene methylmalonyl-CoA epimerase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables amyloid-beta binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendritic spine IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
amyloid-beta A4 precursor protein-binding family A member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023436205.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    2264408..2497076 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037000666.1 → XP_036856561.1  amyloid-beta A4 precursor protein-binding family A member 2 isoform X1

    Conserved Domains (4) summary
    PHA03169
    Location:50 → 333
    PHA03169; hypothetical protein; Provisional
    cd00992
    Location:661 → 734
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd01208
    Location:367 → 539
    PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
    pfam00595
    Location:572 → 655
    PDZ; PDZ domain (Also known as DHR or GLGF)

  2. XM_037000669.1 → XP_036856564.1  amyloid-beta A4 precursor protein-binding family A member 2 isoform X2

    Conserved Domains (4) summary
    PHA03169
    Location:50 → 333
    PHA03169; hypothetical protein; Provisional
    cd00992
    Location:649 → 722
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd01208
    Location:367 → 527
    PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
    pfam00595
    Location:560 → 643
    PDZ; PDZ domain (Also known as DHR or GLGF)

  3. XM_037000667.1 → XP_036856562.1  amyloid-beta A4 precursor protein-binding family A member 2 isoform X1

    Conserved Domains (4) summary
    PHA03169
    Location:50 → 333
    PHA03169; hypothetical protein; Provisional
    cd00992
    Location:661 → 734
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd01208
    Location:367 → 539
    PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
    pfam00595
    Location:572 → 655
    PDZ; PDZ domain (Also known as DHR or GLGF)

  4. XM_037000668.1 → XP_036856563.1  amyloid-beta A4 precursor protein-binding family A member 2 isoform X1

    Conserved Domains (4) summary
    PHA03169
    Location:50 → 333
    PHA03169; hypothetical protein; Provisional
    cd00992
    Location:661 → 734
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd01208
    Location:367 → 539
    PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
    pfam00595
    Location:572 → 655
    PDZ; PDZ domain (Also known as DHR or GLGF)

  5. XM_037000665.1 → XP_036856560.1  amyloid-beta A4 precursor protein-binding family A member 2 isoform X1

    Conserved Domains (4) summary
    PHA03169
    Location:50 → 333
    PHA03169; hypothetical protein; Provisional
    cd00992
    Location:661 → 734
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd01208
    Location:367 → 539
    PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
    pfam00595
    Location:572 → 655
    PDZ; PDZ domain (Also known as DHR or GLGF)
Nucleotide Protein
Heading Accession and Version

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