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B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108310326, updated on 14-Mar-2024

Summary

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Gene symbol
B3GALNT1
Gene description
beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107417.1 (5637787..5664073)

NW_016107417.1Genomic Context describing neighboring genes Neighboring gene elongation factor 1-gamma-like Neighboring gene NMD3 ribosome export adaptor Neighboring gene cleavage stimulation factor subunit 2-like Neighboring gene uncharacterized LOC108310328 Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1L Neighboring gene putative olfactory receptor 2B3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107417 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107417.1 Reference Cebus_imitator-1.0

    Range
    5637787..5664073
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037741660.1 → XP_037597588.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 isoform X2

  2. XM_037741655.1 → XP_037597583.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 isoform X1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  3. XM_017537299.2 → XP_017392788.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 isoform X1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  4. XM_037741654.1 → XP_037597582.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 isoform X1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  5. XM_037741653.1 → XP_037597581.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 isoform X1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  6. XM_037741656.1 → XP_037597584.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 isoform X1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  7. XM_037741662.1 → XP_037597590.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 isoform X3

  8. XM_037741657.1 → XP_037597585.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 isoform X1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  9. XM_037741659.1 → XP_037597587.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 isoform X1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  10. XM_037741661.1 → XP_037597589.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 isoform X3

  11. XM_017537300.2 → XP_017392789.2  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 isoform X4

  12. XM_017537302.2 → XP_017392791.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 isoform X1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  13. XM_037741658.1 → XP_037597586.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 isoform X1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

RNA

  1. XR_005201629.1 RNA Sequence

  2. XR_005201631.1 RNA Sequence

  3. XR_005201632.1 RNA Sequence

  4. XR_005201633.1 RNA Sequence

Nucleotide Protein
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