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ALX1 ALX homeobox 1 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108288051, updated on 14-Mar-2024

Summary

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Gene symbol
ALX1
Gene description
ALX homeobox 1
See related
Ensembl:ENSCCAG00000027294
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107677.1 (838471..859821)

NW_016107677.1Genomic Context describing neighboring genes Neighboring gene tetraspanin 19 Neighboring gene leucine rich repeats and IQ motif containing 1 Neighboring gene U4 spliceosomal RNA Neighboring gene p53 and DNA damage-regulated protein 1-like Neighboring gene TM2 domain-containing protein 3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107677 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in embryonic skeletal system morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ALX homeobox protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107677.1 Reference Cebus_imitator-1.0

    Range
    838471..859821
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017506829.2 → XP_017362318.1  ALX homeobox protein 1

    UniProtKB/TrEMBL
    A0A2K5QSX0
    Related
    ENSCCAP00000018925.1, ENSCCAT00000036403.1
    Conserved Domains (2) summary
    pfam00046
    Location:135 → 189
    Homeobox; Homeobox domain
    pfam03826
    Location:302 → 320
    OAR; OAR domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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