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LOC108267844 tensin-3 [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108267844, updated on 20-Aug-2024

Summary

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Gene symbol
LOC108267844
Gene description
tensin-3
See related
EnsemblRapid:ENSIPUG00020015987
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Also known as
tns3
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Genomic context

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See LOC108267844 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
27
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 7 NC_030422.2 (30019751..30087843, complement)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 7 NC_030422.1 (27230465..27296126, complement)

Chromosome 7 - NC_030422.2Genomic Context describing neighboring genes Neighboring gene insulin-like growth factor-binding protein 3 Neighboring gene insulin-like growth factor binding protein 1b Neighboring gene LRR and PCC domain-containing protein Neighboring gene claudin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tensin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030422.2 Reference Coco_2.0 Primary Assembly

    Range
    30019751..30087843 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017472297.3 → XP_017327786.1  tensin-3 isoform X1

    UniProtKB/TrEMBL
    A0A2D0RCC9
    Related
    ENSIPUP00020032205.1, ENSIPUT00020037957.1

  2. XM_017472298.3 → XP_017327787.1  tensin-3 isoform X2

    UniProtKB/TrEMBL
    A0A2D0RB61
    Related
    ENSIPUP00020032206.1, ENSIPUT00020037958.1
Nucleotide Protein
Heading Accession and Version

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