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fancc FA complementation group C [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108265660, updated on 20-Aug-2024

Summary

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Gene symbol
fancc
Gene description
FA complementation group C
See related
EnsemblRapid:ENSIPUG00020028358
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 5
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 5 NC_030420.2 (20557210..20594833)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 5 NC_030420.1 (19118514..19156340)

Chromosome 5 - NC_030420.2Genomic Context describing neighboring genes Neighboring gene excision repair cross-complementation group 6-like 2 Neighboring gene patched 1 Neighboring gene crooked neck-like protein 1 Neighboring gene aminopeptidase O (putative) Neighboring gene dedicator of cytokinesis 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome Display During Testicular Differentiation of Channel Catfish (Ictalurus punctatus) as Revealed by RNA-Seq Analysis. Zeng Q, et al. Biol Reprod, 2016 Jul. PMID 27307075, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cellular response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Fanconi anaemia nuclear complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Fanconi anemia group C protein
Names
Fanconi anemia complementation group C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030420.2 Reference Coco_2.0 Primary Assembly

    Range
    20557210..20594833
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017468228.3 → XP_017323717.1  Fanconi anemia group C protein

    UniProtKB/TrEMBL
    A0A2D0QZA0, W5U9U6
    Related
    ENSIPUP00020053128.1, ENSIPUT00020068277.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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