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atp6v0a2b ATPase H+ transporting V0 subunit a2b [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108255708, updated on 20-Aug-2024

Summary

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Gene symbol
atp6v0a2b
Gene description
ATPase H+ transporting V0 subunit a2b
See related
EnsemblRapid:ENSIPUG00020001109
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Also known as
atp6v0a2
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 22
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 22 NC_030437.2 (19371247..19391045, complement)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 22 NC_030437.1 (1328969..1347172)

Chromosome 22 - NC_030437.2Genomic Context describing neighboring genes Neighboring gene dynein axonemal heavy chain 10 Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene tRNA methyltransferase 2 homolog A Neighboring gene DGCR8 microprocessor complex subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vacuolar acidification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase, V0 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase 116 kDa subunit a
Names
ATPase H+ transporting V0 subunit a2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030437.2 Reference Coco_2.0 Primary Assembly

    Range
    19371247..19391045 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017451862.3 → XP_017307351.1  V-type proton ATPase 116 kDa subunit a isoform X1

    UniProtKB/TrEMBL
    A0A2D0PPJ3
    Related
    ENSIPUP00020002410.1, ENSIPUT00020002601.1

  2. XM_017451863.3 → XP_017307352.1  V-type proton ATPase 116 kDa subunit a isoform X2

    UniProtKB/TrEMBL
    W5U7X1
    Related
    ENSIPUP00020002388.1, ENSIPUT00020002579.1

  3. XM_053674233.1 → XP_053530208.1  V-type proton ATPase 116 kDa subunit a isoform X3

    UniProtKB/TrEMBL
    A0A9F7TCW3
    Related
    ENSIPUP00020002377.1, ENSIPUT00020002568.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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