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pgap1 post-GPI attachment to proteins inositol deacylase 1 [ Kryptolebias marmoratus (mangrove rivulus) ]

Gene ID: 108249331, updated on 10-Apr-2024

Summary

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Gene symbol
pgap1
Gene description
post-GPI attachment to proteins inositol deacylase 1
See related
EnsemblRapid:ENSKMAG00010015645
Gene type
protein coding
RefSeq status
MODEL
Organism
Kryptolebias marmoratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
Annotation information
Annotation category: partial on reference assembly
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG6
Exon count:
13
Annotation release Status Assembly LG Location
102 current ASM164957v2 (GCF_001649575.2) LG6 NC_051435.1 (2328397..2332930)
101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094673.1 (111488..116150, complement)

Linkage Group LG6 - NC_051435.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat (in FLII) interacting protein 1a Neighboring gene tRNA-yW synthesizing protein 5 Neighboring gene matrix AAA peptidase interacting protein 1 Neighboring gene HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2a Neighboring gene serine/threonine kinase 17b (apoptosis-inducing)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol deacylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI inositol-deacylase
Names
post-GPI attachment to proteins 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM164957v2 Primary Assembly

Genomic

  1. NC_051435.1 Reference ASM164957v2 Primary Assembly

    Range
    2328397..2332930
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017438631.3 → XP_017294120.2  GPI inositol-deacylase

    Related
    ENSKMAT00010035725.1
    Conserved Domains (1) summary
    pfam07819
    Location:89 → 310
    PGAP1; PGAP1-like protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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