U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

washc2c WASH complex subunit 2C [ Kryptolebias marmoratus (mangrove rivulus) ]

Gene ID: 108244702, updated on 10-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
washc2c
Gene description
WASH complex subunit 2C
See related
EnsemblRapid:ENSKMAG00010005914
Gene type
protein coding
RefSeq status
MODEL
Organism
Kryptolebias marmoratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
Also known as
fam21c
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: LG22
Exon count:
31
Annotation release Status Assembly LG Location
102 current ASM164957v2 (GCF_001649575.2) LG22 NC_051451.1 (20634376..20645528, complement)
101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094243.1 (9186820..9197973, complement)

Linkage Group LG22 - NC_051451.1Genomic Context describing neighboring genes Neighboring gene membrane-associated ring finger (C3HC4) 8 Neighboring gene uncharacterized LOC119616696 Neighboring gene zinc finger, AN1-type domain 4 Neighboring gene phosphoglycerate mutase 1 Neighboring gene SMC5-SMC6 complex localization factor 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables retromer complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein localization to endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde transport, endosome to Golgi IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of WASH complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
WASH complex subunit 2
Names
family with sequence similarity 21 member C

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM164957v2 Primary Assembly

Genomic

  1. NC_051451.1 Reference ASM164957v2 Primary Assembly

    Range
    20634376..20645528 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017431123.3 → XP_017286612.1  WASH complex subunit 2 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2ZRU5
    Related
    ENSKMAP00010012239.1, ENSKMAT00010012818.1

  2. XM_017431115.3 → XP_017286604.1  WASH complex subunit 2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2ZRU5
    Related
    ENSKMAP00010012412.1, ENSKMAT00010012992.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.