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lca5 lebercilin LCA5 [ Kryptolebias marmoratus (mangrove rivulus) ]

Gene ID: 108242446, updated on 10-Apr-2024

Summary

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Gene symbol
lca5
Gene description
lebercilin LCA5
See related
EnsemblRapid:ENSKMAG00010010695
Gene type
protein coding
RefSeq status
MODEL
Organism
Kryptolebias marmoratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG19
Exon count:
9
Annotation release Status Assembly LG Location
102 current ASM164957v2 (GCF_001649575.2) LG19 NC_051448.1 (12080350..12086161, complement)
101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094340.1 (848970..854747)

Linkage Group LG19 - NC_051448.1Genomic Context describing neighboring genes Neighboring gene CCM2 scaffold protein Neighboring gene family with sequence similarity 167 member Ab Neighboring gene SH3 domain binding glutamate-rich protein like 2 Neighboring gene deleted in malignant brain tumors 1 protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intraciliary transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axoneme IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lebercilin
Names
LCA5, lebercilin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM164957v2 Primary Assembly

Genomic

  1. NC_051448.1 Reference ASM164957v2 Primary Assembly

    Range
    12080350..12086161 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017427266.3 → XP_017282755.1  lebercilin

    UniProtKB/TrEMBL
    A0A3Q3AL67

  2. XM_017427268.3 → XP_017282757.1  lebercilin

    UniProtKB/TrEMBL
    A0A3Q3AL67
    Related
    ENSKMAP00010023026.1, ENSKMAT00010024057.1
Nucleotide Protein
Heading Accession and Version

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