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vamp3 vesicle-associated membrane protein 3 (cellubrevin) [ Kryptolebias marmoratus (mangrove rivulus) ]

Gene ID: 108235579, updated on 10-Apr-2024

Summary

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Gene symbol
vamp3
Gene description
vesicle-associated membrane protein 3 (cellubrevin)
See related
EnsemblRapid:ENSKMAG00010017915
Gene type
protein coding
RefSeq status
MODEL
Organism
Kryptolebias marmoratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG4
Exon count:
5
Annotation release Status Assembly LG Location
102 current ASM164957v2 (GCF_001649575.2) LG4 NC_051433.1 (17252881..17258421)
101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094274.1 (6083..12896, complement)

Linkage Group LG4 - NC_051433.1Genomic Context describing neighboring genes Neighboring gene myogenin Neighboring gene MDM4 regulator of p53 Neighboring gene period circadian clock 3 Neighboring gene matrix remodeling-associated protein 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables syntaxin-1 binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SNARE complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SNARE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vesicle-associated membrane protein 3
Names
vesicle associated membrane protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM164957v2 Primary Assembly

Genomic

  1. NC_051433.1 Reference ASM164957v2 Primary Assembly

    Range
    17252881..17258421
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017415683.3 → XP_017271172.1  vesicle-associated membrane protein 3

    UniProtKB/TrEMBL
    A0A3Q3G3D7
    Related
    ENSKMAP00010039375.1, ENSKMAT00010041238.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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