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casp9 caspase 9, apoptosis-related cysteine peptidase [ Kryptolebias marmoratus (mangrove rivulus) ]

Gene ID: 108233046, updated on 10-Apr-2024

Summary

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Gene symbol
casp9
Gene description
caspase 9, apoptosis-related cysteine peptidase
See related
EnsemblRapid:ENSKMAG00010012474
Gene type
protein coding
RefSeq status
MODEL
Organism
Kryptolebias marmoratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG8
Exon count:
10
Annotation release Status Assembly LG Location
102 current ASM164957v2 (GCF_001649575.2) LG8 NC_051437.1 (23189935..23192870)
101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094258.1 (869104..872030)

Linkage Group LG8 - NC_051437.1Genomic Context describing neighboring genes Neighboring gene microtubule crosslinking factor 2 Neighboring gene DnaJ (Hsp40) homolog, subfamily C, member 16 Neighboring gene L-rhamnose-binding lectin SML Neighboring gene leucine rich repeat containing 47

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type endopeptidase activity involved in apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type endopeptidase activity involved in execution phase of apoptosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of cysteine-type endopeptidase activity involved in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intrinsic apoptotic signaling pathway in response to DNA damage IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
caspase-9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM164957v2 Primary Assembly

Genomic

  1. NC_051437.1 Reference ASM164957v2 Primary Assembly

    Range
    23189935..23192870
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017411220.3 → XP_017266709.1  caspase-9

    UniProtKB/TrEMBL
    A0A3Q2ZL10
    Related
    ENSKMAP00010026915.1, ENSKMAT00010028130.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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