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SMAC_00761 putative dynein heavy chain protein [ Sordaria macrospora k-hell ]

Gene ID: 10807824, updated on 17-May-2024

Summary

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Gene symbol
SMAC_00761
Gene description
putative dynein heavy chain protein
Primary source
FungiDB:SMAC_00761
Locus tag
SMAC_00761
See related
VEuPathDB:SMAC_00761
Gene type
protein coding
RNA name
putative dynein heavy chain protein
RefSeq status
PROVISIONAL
Organism
Sordaria macrospora k-hell (strain: k-hell)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Sordaria
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Genomic context

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See SMAC_00761 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
5

NW_020185341.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene tRNA-Val Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020185341.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of a 40 Mb eukaryotic genome from short sequence reads: Sordaria macrospora, a model organism for fungal morphogenesis. Nowrousian M, et al. PLoS Genet, 2010 Apr 8. PMID 20386741, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables dynein intermediate chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables dynein light intermediate chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables minus-end-directed microtubule motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule-based movement IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of dynein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative dynein heavy chain protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_020185341.1 Reference assembly

    Range
    480720..494819 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003349822.1 → XP_003349870.1  putative dynein heavy chain protein [Sordaria macrospora k-hell]

    See identical proteins and their annotated locations for XP_003349870.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S9A2I0, F7VN03
    Conserved Domains (8) summary
    COG5245
    Location:1102 → 4254
    DYN1; Dynein, heavy chain [Cytoskeleton]
    pfam03028
    Location:3953 → 4339
    Dynein_heavy; Dynein heavy chain and region D6 of dynein motor
    pfam08385
    Location:287 → 868
    DHC_N1; Dynein heavy chain, N-terminal region 1
    pfam08393
    Location:1379 → 1779
    DHC_N2; Dynein heavy chain, N-terminal region 2
    pfam12777
    Location:3227 → 3560
    MT; Microtubule-binding stalk of dynein motor
    pfam12781
    Location:3589 → 3803
    AAA_9; ATP-binding dynein motor region D5
    cl12013
    Location:1106 → 1259
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
    cl21455
    Location:1920 → 2152
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
Heading Accession and Version

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