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SMAC_06415 hypothetical protein [ Sordaria macrospora k-hell ]

Gene ID: 10802069, updated on 17-May-2024

Summary

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Gene symbol
SMAC_06415
Gene description
hypothetical protein
Primary source
FungiDB:SMAC_06415
Locus tag
SMAC_06415
See related
VEuPathDB:SMAC_06415
Gene type
protein coding
RNA name
uncharacterized protein
RefSeq status
PROVISIONAL
Organism
Sordaria macrospora k-hell (strain: k-hell)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Sordaria
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Genomic context

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See SMAC_06415 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_020185374.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020185374.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of a 40 Mb eukaryotic genome from short sequence reads: Sordaria macrospora, a model organism for fungal morphogenesis. Nowrousian M, et al. PLoS Genet, 2010 Apr 8. PMID 20386741, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 18S rRNA aminocarboxypropyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_020185374.1 Reference assembly

    Range
    202284..203564
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003344712.1 → XP_003344760.1  uncharacterized protein SMAC_06415 [Sordaria macrospora k-hell]

    See identical proteins and their annotated locations for XP_003344760.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S8ZD57, F7W6Q7
    Conserved Domains (2) summary
    pfam04034
    Location:101 → 226
    Ribo_biogen_C; Ribosome biogenesis protein, C-terminal
    pfam04068
    Location:63 → 97
    RLI; Possible Fer4-like domain in RNase L inhibitor, RLI
Nucleotide Protein
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