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LOC107976988 zinc finger protein 345 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 107976988, updated on 19-Dec-2023

Summary

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Gene symbol
LOC107976988
Gene description
zinc finger protein 345
See related
Ensembl:ENSCGRG00015019931
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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Location:
chromosome: 9
Exon count:
4
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003617495.1 (21818..34810, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 9 NC_048602.1 (20750830..20758137, complement)

NW_003617495.1Genomic Context describing neighboring genes Neighboring gene actin-like protein 9 Neighboring gene multifunctional protein ADE2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 345

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003617495.1 Reference CriGri_1.0 Primary Assembly

    Range
    21818..34810 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007655178.4 → XP_007653368.1  zinc finger protein 345 isoform X1

    Conserved Domains (5) summary
    smart00349
    Location:55 → 113
    KRAB; krueppel associated box
    COG5048
    Location:337 → 694
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:547 → 567
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:55 → 94
    KRAB; KRAB box
    pfam13465
    Location:587 → 612
    zf-H2C2_2; Zinc-finger double domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048602.1 Alternate CriGri-PICRH-1.0

    Range
    20750830..20758137 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027433747.2 → XP_027289548.1  zinc finger protein 345 isoform X2

    UniProtKB/TrEMBL
    A0A9J7GP26
    Related
    ENSCGRP00015026263.2, ENSCGRT00015032179.2
Nucleotide Protein Strain
Heading Accession and Version

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