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GRIK4 glutamate ionotropic receptor kainate type subunit 4 [ Miniopterus natalensis ]

Gene ID: 107540623, updated on 30-Mar-2024

Summary

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Gene symbol
GRIK4
Gene description
glutamate ionotropic receptor kainate type subunit 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Miniopterus natalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Miniopteridae; Miniopterus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
100 current Mnat.v1 (GCF_001595765.1) Unplaced Scaffold NW_015504677.1 (193427..635732)

NW_015504677.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107540625

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015504677.1 Unplaced Scaffold Reference Mnat.v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables kainate selective glutamate receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in modulation of chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic transmission, glutamatergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of kainate selective glutamate receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in presynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutamate receptor ionotropic, kainate 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Miniopterus natalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnat.v1

Genomic

  1. NW_015504677.1 Reference Mnat.v1

    Range
    193427..635732
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016217418.1 → XP_016072904.1  glutamate receptor ionotropic, kainate 4 isoform X1

    Conserved Domains (4) summary
    cd13724
    Location:415 → 785
    PBP2_iGluR_kainate_KA1; The ligand-binding domain of the kainate subtype KA1 of ionotropic glutamate receptors, a member of the type 2 periplasmic-binding fold protein superfamily
    pfam00060
    Location:547 → 816
    Lig_chan; Ligand-gated ion channel
    pfam01094
    Location:43 → 380
    ANF_receptor; Receptor family ligand binding region
    cl10011
    Location:26 → 400
    Periplasmic_Binding_Protein_Type_1; Type 1 periplasmic binding fold superfamily

  2. XM_016217419.1 → XP_016072905.1  glutamate receptor ionotropic, kainate 4 isoform X2

    Conserved Domains (4) summary
    pfam00060
    Location:547 → 729
    Lig_chan; Ligand-gated ion channel
    pfam01094
    Location:43 → 380
    ANF_receptor; Receptor family ligand binding region
    cl10011
    Location:26 → 400
    Periplasmic_Binding_Protein_Type_1; Type 1 periplasmic binding fold superfamily
    cl21456
    Location:415 → 729
    Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily

  3. XM_016217420.1 → XP_016072906.1  glutamate receptor ionotropic, kainate 4 isoform X3

    Conserved Domains (4) summary
    cd13724
    Location:306 → 676
    PBP2_iGluR_kainate_KA1; The ligand-binding domain of the kainate subtype KA1 of ionotropic glutamate receptors, a member of the type 2 periplasmic-binding fold protein superfamily
    pfam00060
    Location:438 → 707
    Lig_chan; Ligand-gated ion channel
    pfam01094
    Location:7 → 271
    ANF_receptor; Receptor family ligand binding region
    cl10011
    Location:4 → 291
    Periplasmic_Binding_Protein_Type_1; Type 1 periplasmic binding fold superfamily
Nucleotide Protein
Heading Accession and Version

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