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GTF2H5 general transcription factor IIH subunit 5 [ Rousettus aegyptiacus (Egyptian rousette) ]

Gene ID: 107519833, updated on 30-Mar-2024

Summary

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Gene symbol
GTF2H5
Gene description
general transcription factor IIH subunit 5
Locus tag
HJG63_006033
Gene type
protein coding
RefSeq status
MODEL
Organism
Rousettus aegyptiacus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Rousettinae; Rousettus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current mRouAeg1.p (GCF_014176215.1) Unplaced Scaffold NW_023416284.1 (179686517..179699481)
100 previous assembly Raegyp2.0 (GCF_001466805.2) Unplaced Scaffold NW_015494766.1 (2381885..2394879, complement)

NW_023416284.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene serine active site containing 1 Neighboring gene 5S ribosomal RNA Neighboring gene uncharacterized LOC118603902 Neighboring gene uncharacterized LOC118603904 Neighboring gene TUB like protein 4 Neighboring gene transfer RNA methionine (anticodon CAU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair, preincision complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIH core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIIH holo complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
general transcription factor IIH subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rousettus aegyptiacus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRouAeg1.p

Genomic

  1. NW_023416284.1 Reference mRouAeg1.p

    Range
    179686517..179699481
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016162911.2 → XP_016018397.1  general transcription factor IIH subunit 5

    UniProtKB/TrEMBL
    A0A7J8K953
    Conserved Domains (1) summary
    pfam06331
    Location:1 → 69
    Tfb5; Transcription factor TFIIH complex subunit Tfb5

  2. XM_016162912.2 → XP_016018398.1  general transcription factor IIH subunit 5

    UniProtKB/TrEMBL
    A0A7J8K953
    Conserved Domains (1) summary
    pfam06331
    Location:1 → 69
    Tfb5; Transcription factor TFIIH complex subunit Tfb5

  3. XM_016162914.2 → XP_016018400.1  general transcription factor IIH subunit 5

    UniProtKB/TrEMBL
    A0A7J8K953
    Conserved Domains (1) summary
    pfam06331
    Location:1 → 69
    Tfb5; Transcription factor TFIIH complex subunit Tfb5

  4. XM_016162913.2 → XP_016018399.1  general transcription factor IIH subunit 5

    UniProtKB/TrEMBL
    A0A7J8K953
    Conserved Domains (1) summary
    pfam06331
    Location:1 → 69
    Tfb5; Transcription factor TFIIH complex subunit Tfb5
Nucleotide Protein
Heading Accession and Version

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