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maff v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107388244, updated on 14-Mar-2024

Summary

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Gene symbol
maff
Gene description
v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F
See related
Ensembl:ENSNFUG00015019304
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539926.1 (5588158..5614793)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr12 NC_029660.1 (39040776..39047245, complement)

NW_026539926.1Genomic Context describing neighboring genes Neighboring gene phosphoinositide-interacting protein-like Neighboring gene small nucleolar RNA SNORA55 Neighboring gene ribosomal L1 domain containing 1 Neighboring gene G1 to S phase transition 1 Neighboring gene DNA meiotic recombinase 1 Neighboring gene translocase of outer mitochondrial membrane 22 homolog (yeast) Neighboring gene transmembrane protein 184ba Neighboring gene casein kinase 1, epsilon

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of epidermal cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor MafF
Names
MAF bZIP transcription factor F
v-maf musculoaponeurotic fibrosarcoma oncogene homolog f

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539926.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    5588158..5614793
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054749019.1 → XP_054604994.1  transcription factor MafF isoform X2

  2. XM_015963687.2 → XP_015819173.1  transcription factor MafF isoform X1

    UniProtKB/TrEMBL
    A0A1A7ZX42
    Related
    ENSNFUP00015040121.1
    Conserved Domains (2) summary
    cd14717
    Location:99 → 150
    bZIP_Maf_small; coiled coil [structural motif]
    pfam03131
    Location:69 → 160
    bZIP_Maf; bZIP Maf transcription factor

  3. XM_054749020.1 → XP_054604995.1  transcription factor MafF isoform X2

  4. XM_054749018.1 → XP_054604993.1  transcription factor MafF isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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